STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH46779.1Serine/threonine protein kinase. (769 aa)    
Predicted Functional Partners:
SEH46788.1
Serine/threonine protein phosphatase PrpC.
 
 0.979
SEH78747.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
  
 
 
 0.950
SEH55807.1
Protein phosphatase.
 
 0.907
SEH46797.1
FHA domain-containing protein.
 
 
   0.892
SEH46804.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
 
    0.837
SEH46810.1
AAA domain (Cdc48 subfamily).
 
 
  0.834
SEH55782.1
Serine/threonine protein kinase.
 
 
0.791
SEH46821.1
Hypothetical protein.
       0.773
SEH46827.1
Hypothetical protein.
       0.773
SEH89101.1
PAS domain S-box-containing protein.
  
 
 0.767
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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