STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH47117.1Predicted amidohydrolase. (290 aa)    
Predicted Functional Partners:
SEH47144.1
Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
   
 0.961
SEH47126.1
Putative flavoprotein involved in K+ transport.
 
 
 0.953
SEH47109.1
MSMEG_0572 family protein.
 
   
 0.947
SEH47136.1
Radical SAM protein, MSMEG_0568 family.
 
     0.944
SEH47154.1
Glycosyltransferase, MSMEG_0565 family.
 
  
 0.943
SEH56263.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
  0.824
SEH62743.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
  0.824
SEH91364.1
Delta-1-piperideine-6-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.824
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.815
SEH92489.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
 0.812
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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