STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH48074.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
SEH48078.1
Hypothetical protein.
 
     0.915
SEH48065.1
FtsK/SpoIIIE family protein.
       0.632
SEH48048.1
Hypothetical protein.
       0.631
SEH48058.1
Hypothetical protein.
       0.631
SEH48025.1
Serine/threonine protein kinase.
       0.585
SEH48031.1
Hypothetical protein.
       0.585
SEH48040.1
Proteins of 100 residues with WXG.
       0.585
SEH68452.1
Protein of unknown function; Manually curated.
  
     0.533
SEH90909.1
Wax ester synthase-like Acyl-CoA acyltransferase domain-containing protein.
  
     0.521
SEH80274.1
Hypothetical protein; Belongs to the UPF0235 family.
  
     0.499
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.