Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH48299.1 | SEH48307.1 | SAMN04489835_0336 | SAMN04489835_0337 | Regulatory protein, luxR family. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.450 |
SEH48299.1 | SEH48336.1 | SAMN04489835_0336 | SAMN04489835_0341 | Regulatory protein, luxR family. | HD domain-containing protein. | 0.434 |
SEH48299.1 | ribBA | SAMN04489835_0336 | SAMN04489835_4493 | Regulatory protein, luxR family. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.621 |
SEH48307.1 | SEH48299.1 | SAMN04489835_0337 | SAMN04489835_0336 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Regulatory protein, luxR family. | 0.450 |
SEH48307.1 | SEH48313.1 | SAMN04489835_0337 | SAMN04489835_0338 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Non-heme chloroperoxidase. | 0.648 |
SEH48307.1 | SEH48319.1 | SAMN04489835_0337 | SAMN04489835_0339 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.625 |
SEH48307.1 | SEH48327.1 | SAMN04489835_0337 | SAMN04489835_0340 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NADPH:quinone reductase. | 0.634 |
SEH48307.1 | SEH48336.1 | SAMN04489835_0337 | SAMN04489835_0341 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | HD domain-containing protein. | 0.593 |
SEH48307.1 | SEH48340.1 | SAMN04489835_0337 | SAMN04489835_0342 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.796 |
SEH48307.1 | SEH48350.1 | SAMN04489835_0337 | SAMN04489835_0343 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Deazaflavin-dependent oxidoreductase, nitroreductase family. | 0.593 |
SEH48313.1 | SEH48307.1 | SAMN04489835_0338 | SAMN04489835_0337 | Non-heme chloroperoxidase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.648 |
SEH48313.1 | SEH48319.1 | SAMN04489835_0338 | SAMN04489835_0339 | Non-heme chloroperoxidase. | Hypothetical protein. | 0.773 |
SEH48313.1 | SEH48327.1 | SAMN04489835_0338 | SAMN04489835_0340 | Non-heme chloroperoxidase. | NADPH:quinone reductase. | 0.791 |
SEH48313.1 | SEH48336.1 | SAMN04489835_0338 | SAMN04489835_0341 | Non-heme chloroperoxidase. | HD domain-containing protein. | 0.731 |
SEH48313.1 | SEH48340.1 | SAMN04489835_0338 | SAMN04489835_0342 | Non-heme chloroperoxidase. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.731 |
SEH48313.1 | SEH48350.1 | SAMN04489835_0338 | SAMN04489835_0343 | Non-heme chloroperoxidase. | Deazaflavin-dependent oxidoreductase, nitroreductase family. | 0.731 |
SEH48319.1 | SEH48307.1 | SAMN04489835_0339 | SAMN04489835_0337 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.625 |
SEH48319.1 | SEH48313.1 | SAMN04489835_0339 | SAMN04489835_0338 | Hypothetical protein. | Non-heme chloroperoxidase. | 0.773 |
SEH48319.1 | SEH48327.1 | SAMN04489835_0339 | SAMN04489835_0340 | Hypothetical protein. | NADPH:quinone reductase. | 0.768 |
SEH48319.1 | SEH48336.1 | SAMN04489835_0339 | SAMN04489835_0341 | Hypothetical protein. | HD domain-containing protein. | 0.782 |
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