Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH49626.1 | SEH49640.1 | SAMN04489835_0521 | SAMN04489835_0523 | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | Protein of unknown function; Manually curated. | 0.535 |
SEH49626.1 | SEH49650.1 | SAMN04489835_0521 | SAMN04489835_0524 | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | Protein of unknown function. | 0.459 |
SEH49626.1 | SEH49656.1 | SAMN04489835_0521 | SAMN04489835_0525 | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | Hypothetical protein. | 0.422 |
SEH49626.1 | murB | SAMN04489835_0521 | SAMN04489835_0522 | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.813 |
SEH49640.1 | SEH49626.1 | SAMN04489835_0523 | SAMN04489835_0521 | Protein of unknown function; Manually curated. | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | 0.535 |
SEH49640.1 | SEH49650.1 | SAMN04489835_0523 | SAMN04489835_0524 | Protein of unknown function; Manually curated. | Protein of unknown function. | 0.730 |
SEH49640.1 | SEH49656.1 | SAMN04489835_0523 | SAMN04489835_0525 | Protein of unknown function; Manually curated. | Hypothetical protein. | 0.587 |
SEH49640.1 | murB | SAMN04489835_0523 | SAMN04489835_0522 | Protein of unknown function; Manually curated. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.811 |
SEH49650.1 | SEH49626.1 | SAMN04489835_0524 | SAMN04489835_0521 | Protein of unknown function. | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | 0.459 |
SEH49650.1 | SEH49640.1 | SAMN04489835_0524 | SAMN04489835_0523 | Protein of unknown function. | Protein of unknown function; Manually curated. | 0.730 |
SEH49650.1 | SEH49656.1 | SAMN04489835_0524 | SAMN04489835_0525 | Protein of unknown function. | Hypothetical protein. | 0.660 |
SEH49650.1 | murB | SAMN04489835_0524 | SAMN04489835_0522 | Protein of unknown function. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.549 |
SEH49656.1 | SEH49626.1 | SAMN04489835_0525 | SAMN04489835_0521 | Hypothetical protein. | Lipoprotein-anchoring transpeptidase ErfK/SrfK. | 0.422 |
SEH49656.1 | SEH49640.1 | SAMN04489835_0525 | SAMN04489835_0523 | Hypothetical protein. | Protein of unknown function; Manually curated. | 0.587 |
SEH49656.1 | SEH49650.1 | SAMN04489835_0525 | SAMN04489835_0524 | Hypothetical protein. | Protein of unknown function. | 0.660 |
SEH49656.1 | SEH51731.1 | SAMN04489835_0525 | SAMN04489835_0851 | Hypothetical protein. | Acyl transferase domain-containing protein. | 0.562 |
SEH49656.1 | SEH60642.1 | SAMN04489835_0525 | SAMN04489835_1952 | Hypothetical protein. | Peptidase family M1. | 0.436 |
SEH49656.1 | SEH63060.1 | SAMN04489835_0525 | SAMN04489835_2243 | Hypothetical protein. | Hypothetical protein. | 0.425 |
SEH49656.1 | SEH65919.1 | SAMN04489835_0525 | SAMN04489835_2558 | Hypothetical protein. | Polyketide synthase 5. | 0.556 |
SEH49656.1 | SEH92330.1 | SAMN04489835_0525 | SAMN04489835_5749 | Hypothetical protein. | Hypothetical protein. | 0.445 |
page 1 of 2