STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH50280.1Hypothetical protein. (583 aa)    
Predicted Functional Partners:
SEH50287.1
Vitamin K-dependent gamma-carboxylase.
 
     0.800
SEH50269.1
Glycosyltransferase involved in cell wall bisynthesis.
     
 0.776
SEH50253.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
       0.775
SEH50260.1
Chain length determinant protein.
       0.773
SEH50274.1
Hypothetical protein.
       0.773
SEH50293.1
Hypothetical protein.
       0.773
SEH57498.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.729
SEH50235.1
Glycosyltransferase, GT2 family.
     
 0.701
SEH49909.1
Hypothetical protein.
 
  
 0.683
SEH50248.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.676
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.