Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH49850.1 | SEH52286.1 | SAMN04489835_0555 | SAMN04489835_0922 | Prolyl oligopeptidase. | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | 0.537 |
SEH52269.1 | SEH52273.1 | SAMN04489835_0920 | SAMN04489835_0921 | Hypothetical protein. | Hypothetical protein. | 0.922 |
SEH52269.1 | SEH52286.1 | SAMN04489835_0920 | SAMN04489835_0922 | Hypothetical protein. | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | 0.623 |
SEH52269.1 | polA | SAMN04489835_0920 | SAMN04489835_4320 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.409 |
SEH52273.1 | SEH52269.1 | SAMN04489835_0921 | SAMN04489835_0920 | Hypothetical protein. | Hypothetical protein. | 0.922 |
SEH52273.1 | SEH52286.1 | SAMN04489835_0921 | SAMN04489835_0922 | Hypothetical protein. | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | 0.623 |
SEH52273.1 | polA | SAMN04489835_0921 | SAMN04489835_4320 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.409 |
SEH52286.1 | SEH49850.1 | SAMN04489835_0922 | SAMN04489835_0555 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Prolyl oligopeptidase. | 0.537 |
SEH52286.1 | SEH52269.1 | SAMN04489835_0922 | SAMN04489835_0920 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Hypothetical protein. | 0.623 |
SEH52286.1 | SEH52273.1 | SAMN04489835_0922 | SAMN04489835_0921 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Hypothetical protein. | 0.623 |
SEH52286.1 | SEH73042.1 | SAMN04489835_0922 | SAMN04489835_3391 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01. | 0.814 |
SEH52286.1 | SEH76361.1 | SAMN04489835_0922 | SAMN04489835_3805 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.543 |
SEH52286.1 | SEH82092.1 | SAMN04489835_0922 | SAMN04489835_4531 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Xaa-Pro aminopeptidase. | 0.479 |
SEH52286.1 | pepA | SAMN04489835_0922 | SAMN04489835_3652 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.525 |
SEH52286.1 | polA | SAMN04489835_0922 | SAMN04489835_4320 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.597 |
SEH52286.1 | ruvB | SAMN04489835_0922 | SAMN04489835_4645 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.562 |
SEH52286.1 | truA | SAMN04489835_0922 | SAMN04489835_5807 | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.535 |
SEH73042.1 | SEH52286.1 | SAMN04489835_3391 | SAMN04489835_0922 | Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01. | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | 0.814 |
SEH73042.1 | pepA | SAMN04489835_3391 | SAMN04489835_3652 | Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.901 |
SEH76361.1 | SEH52286.1 | SAMN04489835_3805 | SAMN04489835_0922 | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | Endothelin-converting enzyme Metallo peptidase. MEROPS family M13. | 0.543 |
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