STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH55460.1Amino acid ABC transporter ATP-binding protein, PAAT family. (244 aa)    
Predicted Functional Partners:
SEH55454.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
 0.999
SEH59308.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
 0.993
SEH80384.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.987
SEH84182.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.984
SEH84189.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.984
SEH67351.1
Polar amino acid transport system permease protein.
 0.979
SEH67358.1
Polar amino acid transport system permease protein.
 
 0.966
SEH84174.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.893
SEH81635.1
ABC-type amino acid transport substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.883
SEH50505.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.875
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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