STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH56445.1Uncharacterized membrane protein. (175 aa)    
Predicted Functional Partners:
SEH45799.1
Reductase C-terminal.
  
 0.846
SEH46660.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.846
SEH47891.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.846
SEH51621.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.846
SEH58245.1
Phthalate 3,4-dioxygenase, ferredoxin reductase subunit.
  
 0.846
SEH78138.1
Bacterioferritin-associated ferredoxin.
  
 0.828
SEH54920.1
Adenylate cyclase.
   
  0.795
SEH67107.1
YHS domain-containing protein.
   
  0.795
SEH84870.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.713
SEH75822.1
Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.691
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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