STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH64594.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (304 aa)    
Predicted Functional Partners:
SEH64570.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    0.965
SEH72665.1
Fatty acid synthase.
  
 0.959
SEH92168.1
Acyl dehydratase.
 
    0.939
SEH61941.1
Acyl dehydratase.
 
    0.924
SEH64656.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
   0.915
SEH64589.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
     0.911
SEH64557.1
Sugar lactone lactonase YvrE.
 
  
  0.863
SEH64579.1
Rieske [2Fe-2S] domain-containing protein.
 
  
  0.857
SEH51792.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
    
0.849
SEH64619.1
Acyl-CoA dehydrogenase, C-terminal domain.
 
     0.846
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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