STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH65551.1DNA-binding transcriptional regulator, AcrR family. (201 aa)    
Predicted Functional Partners:
SEH65564.1
Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family.
       0.557
SEH65572.1
Cytochrome P450.
       0.553
SEH71904.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
  
     0.502
SEH87533.1
YCII-related domain-containing protein.
  
     0.466
SEH61932.1
Protein of unknown function.
  
     0.464
SEH59951.1
Methyltransferase domain-containing protein.
  
 
   0.440
SEH65580.1
FMNH2-dependent dimethyl sulfone monooxygenase.
       0.415
SEH82266.1
PPE family protein.
  
     0.414
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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