Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH70788.1 | SEH71311.1 | SAMN04489835_3117 | SAMN04489835_3175 | methylmalonyl-CoA epimerase. | methylmalonyl-CoA mutase. | 0.988 |
SEH70788.1 | SEH71319.1 | SAMN04489835_3117 | SAMN04489835_3176 | methylmalonyl-CoA epimerase. | methylmalonyl-CoA mutase, C-terminal domain. | 0.997 |
SEH70788.1 | SEH71399.1 | SAMN04489835_3117 | SAMN04489835_3186 | methylmalonyl-CoA epimerase. | LAO/AO transport system kinase. | 0.853 |
SEH70788.1 | SEH73221.1 | SAMN04489835_3117 | SAMN04489835_3413 | methylmalonyl-CoA epimerase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.626 |
SEH70788.1 | SEH81077.1 | SAMN04489835_3117 | SAMN04489835_4424 | methylmalonyl-CoA epimerase. | methylmalonyl-CoA mutase metallochaperone MeaB. | 0.818 |
SEH70788.1 | SEH81084.1 | SAMN04489835_3117 | SAMN04489835_4425 | methylmalonyl-CoA epimerase. | methylmalonyl-CoA mutase. | 0.990 |
SEH70788.1 | SEH81095.1 | SAMN04489835_3117 | SAMN04489835_4426 | methylmalonyl-CoA epimerase. | methylmalonyl-CoA mutase. | 0.991 |
SEH71311.1 | SEH70788.1 | SAMN04489835_3175 | SAMN04489835_3117 | methylmalonyl-CoA mutase. | methylmalonyl-CoA epimerase. | 0.988 |
SEH71311.1 | SEH71319.1 | SAMN04489835_3175 | SAMN04489835_3176 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase, C-terminal domain. | 0.999 |
SEH71311.1 | SEH71399.1 | SAMN04489835_3175 | SAMN04489835_3186 | methylmalonyl-CoA mutase. | LAO/AO transport system kinase. | 0.991 |
SEH71311.1 | SEH73221.1 | SAMN04489835_3175 | SAMN04489835_3413 | methylmalonyl-CoA mutase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.908 |
SEH71311.1 | SEH73230.1 | SAMN04489835_3175 | SAMN04489835_3414 | methylmalonyl-CoA mutase. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.877 |
SEH71311.1 | SEH81077.1 | SAMN04489835_3175 | SAMN04489835_4424 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase metallochaperone MeaB. | 0.955 |
SEH71311.1 | SEH81084.1 | SAMN04489835_3175 | SAMN04489835_4425 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase. | 0.904 |
SEH71311.1 | SEH81095.1 | SAMN04489835_3175 | SAMN04489835_4426 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase. | 0.998 |
SEH71311.1 | sucC | SAMN04489835_3175 | SAMN04489835_2512 | methylmalonyl-CoA mutase. | succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.883 |
SEH71311.1 | sucD | SAMN04489835_3175 | SAMN04489835_2513 | methylmalonyl-CoA mutase. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.887 |
SEH71319.1 | SEH70788.1 | SAMN04489835_3176 | SAMN04489835_3117 | methylmalonyl-CoA mutase, C-terminal domain. | methylmalonyl-CoA epimerase. | 0.997 |
SEH71319.1 | SEH71311.1 | SAMN04489835_3176 | SAMN04489835_3175 | methylmalonyl-CoA mutase, C-terminal domain. | methylmalonyl-CoA mutase. | 0.999 |
SEH71319.1 | SEH71399.1 | SAMN04489835_3176 | SAMN04489835_3186 | methylmalonyl-CoA mutase, C-terminal domain. | LAO/AO transport system kinase. | 0.965 |
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