STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH73906.1Mycobactin phenyloxazoline synthetase. (1152 aa)    
Predicted Functional Partners:
SEH51731.1
Acyl transferase domain-containing protein.
 0.999
SEH57573.1
Polyketide synthase 13.
 0.999
SEH65919.1
Polyketide synthase 5.
 0.999
SEH73893.1
Mycobactin salicyl-AMP ligase.
0.999
SEH73951.1
Mycobactin polyketide synthetase MbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 0.999
SEH73963.1
Mycobactin polyketide synthetase MbtD.
 0.999
SEH74000.1
MbtH protein.
 
 0.999
SEH54548.1
Fatty acid CoA ligase FadD9.
 
0.998
SEH73943.1
Surfactin synthase thioesterase subunit.
 
 0.998
SEH90393.1
Isochorismate synthase.
 
 
 0.981
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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