Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH55595.1 | SEH74831.1 | SAMN04489835_1371 | SAMN04489835_3607 | Thioredoxin reductase (NADPH). | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.700 |
SEH74802.1 | SEH74813.1 | SAMN04489835_3604 | SAMN04489835_3605 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Hypothetical protein. | 0.648 |
SEH74802.1 | SEH74820.1 | SAMN04489835_3604 | SAMN04489835_3606 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Protein of unknown function. | 0.536 |
SEH74802.1 | SEH74831.1 | SAMN04489835_3604 | SAMN04489835_3607 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.494 |
SEH74813.1 | SEH74802.1 | SAMN04489835_3605 | SAMN04489835_3604 | Hypothetical protein. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.648 |
SEH74813.1 | SEH74820.1 | SAMN04489835_3605 | SAMN04489835_3606 | Hypothetical protein. | Protein of unknown function. | 0.896 |
SEH74813.1 | SEH74831.1 | SAMN04489835_3605 | SAMN04489835_3607 | Hypothetical protein. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.817 |
SEH74820.1 | SEH74802.1 | SAMN04489835_3606 | SAMN04489835_3604 | Protein of unknown function. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.536 |
SEH74820.1 | SEH74813.1 | SAMN04489835_3606 | SAMN04489835_3605 | Protein of unknown function. | Hypothetical protein. | 0.896 |
SEH74820.1 | SEH74831.1 | SAMN04489835_3606 | SAMN04489835_3607 | Protein of unknown function. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.934 |
SEH74820.1 | SEH80203.1 | SAMN04489835_3606 | SAMN04489835_4316 | Protein of unknown function. | SSU ribosomal protein S1P. | 0.623 |
SEH74831.1 | SEH55595.1 | SAMN04489835_3607 | SAMN04489835_1371 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thioredoxin reductase (NADPH). | 0.700 |
SEH74831.1 | SEH74802.1 | SAMN04489835_3607 | SAMN04489835_3604 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.494 |
SEH74831.1 | SEH74813.1 | SAMN04489835_3607 | SAMN04489835_3605 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Hypothetical protein. | 0.817 |
SEH74831.1 | SEH74820.1 | SAMN04489835_3607 | SAMN04489835_3606 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Protein of unknown function. | 0.934 |
SEH74831.1 | SEH75984.1 | SAMN04489835_3607 | SAMN04489835_3753 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.598 |
SEH74831.1 | SEH80203.1 | SAMN04489835_3607 | SAMN04489835_4316 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | SSU ribosomal protein S1P. | 0.467 |
SEH74831.1 | SEH80566.1 | SAMN04489835_3607 | SAMN04489835_4368 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Peroxiredoxin Q/BCP. | 0.451 |
SEH74831.1 | SEH92454.1 | SAMN04489835_3607 | SAMN04489835_5765 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.477 |
SEH74831.1 | lgt | SAMN04489835_3607 | SAMN04489835_4361 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.437 |
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