STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH76361.1Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (380 aa)    
Predicted Functional Partners:
SEH76349.1
5'-3' exonuclease.
  
  
 0.811
SEH76355.1
Catechol 2,3-dioxygenase.
       0.773
SEH76211.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.759
SEH85320.1
Acetyltransferase (GNAT) domain-containing protein.
   
 
 0.657
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.607
SEH92535.1
Ectoine hydroxylase.
    
 0.600
SEH59660.1
Glycine/D-amino acid oxidase.
  
 
  0.593
ectC
Ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
    
  0.591
SEH52286.1
Endothelin-converting enzyme Metallo peptidase. MEROPS family M13.
  
 
 0.543
SEH53626.1
Sarcosine oxidase.
  
 
  0.541
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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