STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase. (465 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.994
SEH91462.1
L-ribulose 5-phosphate 4-epimerase.
 
 
 0.933
SEH81828.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.915
SEH76669.1
Xylulokinase; Belongs to the FGGY kinase family.
 
  
 
0.882
SEH91469.1
L-ribulokinase; Belongs to the ribulokinase family.
 
 
 0.862
SEH85220.1
Sugar (pentulose or hexulose) kinase.
 
  
  0.831
SEH65052.1
Fructokinase.
 
 
 0.709
SEH55688.1
6-phosphogluconate dehydrogenase (decarboxylating).
  
 
 0.700
SEH91378.1
L-rhamnose mutarotase.
  
  
 0.696
SEH91554.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.691
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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