STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH79262.1Alcohol dehydrogenase. (385 aa)    
Predicted Functional Partners:
SEH46381.1
Alcohol dehydrogenase, class IV.
    
 0.929
SEH53426.1
Putative phosphonate catabolism associated alcohol dehydrogenase.
  
 
  0.823
SEH50833.1
Alcohol dehydrogenase.
  
 
0.812
SEH72525.1
Threonine dehydrogenase.
  
 
  0.809
SEH50952.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.806
SEH54148.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.806
SEH78502.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.796
SEH87540.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
  
 
0.784
SEH80661.1
D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family.
  
 
  0.773
SEH58127.1
Threonine dehydrogenase.
 
 
 
0.711
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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