STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH84790.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
SEH84801.1
Protein of unknown function.
 
    0.928
rimP
Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.779
SEH57326.1
Septum formation.
  
     0.770
SEH55565.1
Hypothetical protein.
  
     0.754
SEH70044.1
Protein of unknown function.
  
     0.696
SEH66462.1
Cell division protein FtsB.
  
     0.689
SEH63187.1
Protein of unknown function.
  
     0.671
SEH55719.1
Transmembrane protein of unknown function.
  
     0.660
SEH45937.1
Protein of unknown function.
  
     0.651
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
       0.651
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.