Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH51731.1 | SEH63720.1 | SAMN04489835_0851 | SAMN04489835_2319 | Acyl transferase domain-containing protein. | Short chain enoyl-CoA hydratase. | 0.973 |
SEH51731.1 | SEH65919.1 | SAMN04489835_0851 | SAMN04489835_2558 | Acyl transferase domain-containing protein. | Polyketide synthase 5. | 0.999 |
SEH51731.1 | SEH87287.1 | SAMN04489835_0851 | SAMN04489835_5129 | Acyl transferase domain-containing protein. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.787 |
SEH51731.1 | SEH87295.1 | SAMN04489835_0851 | SAMN04489835_5130 | Acyl transferase domain-containing protein. | Electron transfer flavoprotein beta subunit. | 0.719 |
SEH51731.1 | SEH88336.1 | SAMN04489835_0851 | SAMN04489835_5253 | Acyl transferase domain-containing protein. | (2S)-methylsuccinyl-CoA dehydrogenase. | 0.624 |
SEH51731.1 | SEH88343.1 | SAMN04489835_0851 | SAMN04489835_5254 | Acyl transferase domain-containing protein. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.643 |
SEH51731.1 | SEH88355.1 | SAMN04489835_0851 | SAMN04489835_5255 | Acyl transferase domain-containing protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.759 |
SEH51731.1 | SEH88362.1 | SAMN04489835_0851 | SAMN04489835_5256 | Acyl transferase domain-containing protein. | acyl-CoA dehydrogenase. | 0.624 |
SEH63720.1 | SEH51731.1 | SAMN04489835_2319 | SAMN04489835_0851 | Short chain enoyl-CoA hydratase. | Acyl transferase domain-containing protein. | 0.973 |
SEH63720.1 | SEH65919.1 | SAMN04489835_2319 | SAMN04489835_2558 | Short chain enoyl-CoA hydratase. | Polyketide synthase 5. | 0.973 |
SEH63720.1 | SEH87287.1 | SAMN04489835_2319 | SAMN04489835_5129 | Short chain enoyl-CoA hydratase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.847 |
SEH63720.1 | SEH87295.1 | SAMN04489835_2319 | SAMN04489835_5130 | Short chain enoyl-CoA hydratase. | Electron transfer flavoprotein beta subunit. | 0.821 |
SEH63720.1 | SEH88336.1 | SAMN04489835_2319 | SAMN04489835_5253 | Short chain enoyl-CoA hydratase. | (2S)-methylsuccinyl-CoA dehydrogenase. | 0.757 |
SEH63720.1 | SEH88343.1 | SAMN04489835_2319 | SAMN04489835_5254 | Short chain enoyl-CoA hydratase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.995 |
SEH63720.1 | SEH88362.1 | SAMN04489835_2319 | SAMN04489835_5256 | Short chain enoyl-CoA hydratase. | acyl-CoA dehydrogenase. | 0.966 |
SEH65919.1 | SEH51731.1 | SAMN04489835_2558 | SAMN04489835_0851 | Polyketide synthase 5. | Acyl transferase domain-containing protein. | 0.999 |
SEH65919.1 | SEH63720.1 | SAMN04489835_2558 | SAMN04489835_2319 | Polyketide synthase 5. | Short chain enoyl-CoA hydratase. | 0.973 |
SEH65919.1 | SEH87287.1 | SAMN04489835_2558 | SAMN04489835_5129 | Polyketide synthase 5. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.787 |
SEH65919.1 | SEH87295.1 | SAMN04489835_2558 | SAMN04489835_5130 | Polyketide synthase 5. | Electron transfer flavoprotein beta subunit. | 0.719 |
SEH65919.1 | SEH88336.1 | SAMN04489835_2558 | SAMN04489835_5253 | Polyketide synthase 5. | (2S)-methylsuccinyl-CoA dehydrogenase. | 0.624 |
page 1 of 4