Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH46002.1 | SEH89005.1 | SAMN04489835_0044 | SAMN04489835_5326 | Endonuclease IV. | Polyhydroxybutyrate depolymerase. | 0.581 |
SEH46797.1 | SEH89005.1 | SAMN04489835_0144 | SAMN04489835_5326 | FHA domain-containing protein. | Polyhydroxybutyrate depolymerase. | 0.445 |
SEH79838.1 | SEH89005.1 | SAMN04489835_4268 | SAMN04489835_5326 | Putative long chain acyl-CoA synthase. | Polyhydroxybutyrate depolymerase. | 0.620 |
SEH88987.1 | SEH88996.1 | SAMN04489835_5324 | SAMN04489835_5325 | Catechol 2,3-dioxygenase. | Acetyl esterase/lipase. | 0.737 |
SEH88987.1 | SEH89005.1 | SAMN04489835_5324 | SAMN04489835_5326 | Catechol 2,3-dioxygenase. | Polyhydroxybutyrate depolymerase. | 0.605 |
SEH88987.1 | SEH89014.1 | SAMN04489835_5324 | SAMN04489835_5327 | Catechol 2,3-dioxygenase. | GAF domain-containing protein. | 0.425 |
SEH88996.1 | SEH88987.1 | SAMN04489835_5325 | SAMN04489835_5324 | Acetyl esterase/lipase. | Catechol 2,3-dioxygenase. | 0.737 |
SEH88996.1 | SEH89005.1 | SAMN04489835_5325 | SAMN04489835_5326 | Acetyl esterase/lipase. | Polyhydroxybutyrate depolymerase. | 0.634 |
SEH88996.1 | SEH89014.1 | SAMN04489835_5325 | SAMN04489835_5327 | Acetyl esterase/lipase. | GAF domain-containing protein. | 0.443 |
SEH89005.1 | SEH46002.1 | SAMN04489835_5326 | SAMN04489835_0044 | Polyhydroxybutyrate depolymerase. | Endonuclease IV. | 0.581 |
SEH89005.1 | SEH46797.1 | SAMN04489835_5326 | SAMN04489835_0144 | Polyhydroxybutyrate depolymerase. | FHA domain-containing protein. | 0.445 |
SEH89005.1 | SEH79838.1 | SAMN04489835_5326 | SAMN04489835_4268 | Polyhydroxybutyrate depolymerase. | Putative long chain acyl-CoA synthase. | 0.620 |
SEH89005.1 | SEH88987.1 | SAMN04489835_5326 | SAMN04489835_5324 | Polyhydroxybutyrate depolymerase. | Catechol 2,3-dioxygenase. | 0.605 |
SEH89005.1 | SEH88996.1 | SAMN04489835_5326 | SAMN04489835_5325 | Polyhydroxybutyrate depolymerase. | Acetyl esterase/lipase. | 0.634 |
SEH89005.1 | SEH89014.1 | SAMN04489835_5326 | SAMN04489835_5327 | Polyhydroxybutyrate depolymerase. | GAF domain-containing protein. | 0.529 |
SEH89005.1 | SEH91650.1 | SAMN04489835_5326 | SAMN04489835_5658 | Polyhydroxybutyrate depolymerase. | tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase; Manually curated. | 0.530 |
SEH89005.1 | speE | SAMN04489835_5326 | SAMN04489835_5108 | Polyhydroxybutyrate depolymerase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.451 |
SEH89014.1 | SEH88987.1 | SAMN04489835_5327 | SAMN04489835_5324 | GAF domain-containing protein. | Catechol 2,3-dioxygenase. | 0.425 |
SEH89014.1 | SEH88996.1 | SAMN04489835_5327 | SAMN04489835_5325 | GAF domain-containing protein. | Acetyl esterase/lipase. | 0.443 |
SEH89014.1 | SEH89005.1 | SAMN04489835_5327 | SAMN04489835_5326 | GAF domain-containing protein. | Polyhydroxybutyrate depolymerase. | 0.529 |
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