STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH90505.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
SEH90512.1
Hypothetical protein.
       0.727
SEH90520.1
Uncharacterized conserved protein, DUF2236 family.
       0.727
SEH90529.1
Hypothetical protein.
       0.727
SEH90533.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
       0.524
SEH90544.1
DNA-binding transcriptional regulator, AcrR family.
       0.524
SEH90806.1
Dehydrogenase (flavoprotein).
  
     0.444
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.