STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH91818.1Alkylhydroperoxidase family enzyme, contains CxxC motif. (199 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.485
SEH84280.1
Hypothetical protein.
  
     0.462
SEH84035.1
LysM domain-containing protein.
  
     0.450
SEH58949.1
4-carboxymuconolactone decarboxylase.
    
 0.441
SEH91858.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.414
SEH51592.1
Aminoglycoside 2'-N-acetyltransferase I.
  
     0.413
SEH65593.1
Hypothetical protein.
  
     0.413
SEH50180.1
LytR cell envelope-related transcriptional attenuator.
  
     0.411
SEH66220.1
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family.
 
     0.403
Your Current Organism:
Mycolicibacterium rutilum
NCBI taxonomy Id: 370526
Other names: CIP 109271, DSM 45405, JCM 16371, M. rutilum, Mycobacterium rutilum, Mycobacterium rutilum Hennessee et al. 2009, Mycobacterium sp. czh-107, Mycobacterium sp. czh-117, Mycobacterium sp. czh-132, Mycolicibacterium rutilum (Hennessee et al. 2009) Gupta et al. 2018, strain czh-117
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