Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH56077.1 | SEH82472.1 | SAMN04489835_1440 | SAMN04489835_4576 | Hypothetical protein. | Uncharacterized conserved protein. | 0.470 |
SEH56077.1 | SEH86806.1 | SAMN04489835_1440 | SAMN04489835_5072 | Hypothetical protein. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.472 |
SEH56077.1 | SEH87636.1 | SAMN04489835_1440 | SAMN04489835_5173 | Hypothetical protein. | Hypothetical protein. | 0.472 |
SEH56077.1 | SEH92337.1 | SAMN04489835_1440 | SAMN04489835_5750 | Hypothetical protein. | Anti-sigma-D factor RsdA to sigma factor binding region. | 0.459 |
SEH56077.1 | SEH93158.1 | SAMN04489835_1440 | SAMN04489835_5851 | Hypothetical protein. | Protein of unknown function. | 0.472 |
SEH82472.1 | SEH56077.1 | SAMN04489835_4576 | SAMN04489835_1440 | Uncharacterized conserved protein. | Hypothetical protein. | 0.470 |
SEH82472.1 | SEH86806.1 | SAMN04489835_4576 | SAMN04489835_5072 | Uncharacterized conserved protein. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.470 |
SEH82472.1 | SEH87636.1 | SAMN04489835_4576 | SAMN04489835_5173 | Uncharacterized conserved protein. | Hypothetical protein. | 0.470 |
SEH82472.1 | SEH92337.1 | SAMN04489835_4576 | SAMN04489835_5750 | Uncharacterized conserved protein. | Anti-sigma-D factor RsdA to sigma factor binding region. | 0.528 |
SEH82472.1 | SEH93158.1 | SAMN04489835_4576 | SAMN04489835_5851 | Uncharacterized conserved protein. | Protein of unknown function. | 0.470 |
SEH86806.1 | SEH56077.1 | SAMN04489835_5072 | SAMN04489835_1440 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Hypothetical protein. | 0.472 |
SEH86806.1 | SEH82472.1 | SAMN04489835_5072 | SAMN04489835_4576 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Uncharacterized conserved protein. | 0.470 |
SEH86806.1 | SEH87636.1 | SAMN04489835_5072 | SAMN04489835_5173 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Hypothetical protein. | 0.472 |
SEH86806.1 | SEH92337.1 | SAMN04489835_5072 | SAMN04489835_5750 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Anti-sigma-D factor RsdA to sigma factor binding region. | 0.455 |
SEH86806.1 | SEH93158.1 | SAMN04489835_5072 | SAMN04489835_5851 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Protein of unknown function. | 0.472 |
SEH87636.1 | SEH56077.1 | SAMN04489835_5173 | SAMN04489835_1440 | Hypothetical protein. | Hypothetical protein. | 0.472 |
SEH87636.1 | SEH82472.1 | SAMN04489835_5173 | SAMN04489835_4576 | Hypothetical protein. | Uncharacterized conserved protein. | 0.470 |
SEH87636.1 | SEH86806.1 | SAMN04489835_5173 | SAMN04489835_5072 | Hypothetical protein. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.472 |
SEH87636.1 | SEH92337.1 | SAMN04489835_5173 | SAMN04489835_5750 | Hypothetical protein. | Anti-sigma-D factor RsdA to sigma factor binding region. | 0.455 |
SEH87636.1 | SEH93158.1 | SAMN04489835_5173 | SAMN04489835_5851 | Hypothetical protein. | Protein of unknown function. | 0.472 |
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