STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHJ53712.1Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
KHJ53048.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
  
 0.969
KHJ53098.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.939
KHJ55346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.860
KHJ54019.1
Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.860
KHJ54010.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.852
KHJ53713.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.837
KHJ56161.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.828
KHJ53711.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.825
KHJ56137.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.818
KHJ56160.1
N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.802
Your Current Organism:
Aureimonas altamirensis
NCBI taxonomy Id: 370622
Other names: A. altamirensis, Aurantimonas altamirensis, Aurantimonas altamirensis Jurado et al. 2006, Aureimonas altamirensis (Jurado et al. 2006) Rathsack et al. 2011, CECT 7138, CIP 109525, DSM 21988, KCTC 22106, LMG 23375, LMG:23375, NBRC 107774, NCIMB 14392, strain S21B
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