Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG33612.1 | SDG33643.1 | SAMN04489810_0024 | SAMN04489810_0025 | Mechanosensitive ion channel. | Adenylate cyclase, class 3. | 0.990 |
SDG33612.1 | SDG35843.1 | SAMN04489810_0024 | SAMN04489810_0084 | Mechanosensitive ion channel. | Hypothetical protein. | 0.837 |
SDG33612.1 | SDH28790.1 | SAMN04489810_0024 | SAMN04489810_2620 | Mechanosensitive ion channel. | Glutamate synthase (NADH) large subunit. | 0.927 |
SDG33612.1 | SDH34776.1 | SAMN04489810_0024 | SAMN04489810_2859 | Mechanosensitive ion channel. | Hypothetical protein. | 0.839 |
SDG33612.1 | SDH55976.1 | SAMN04489810_0024 | SAMN04489810_3324 | Mechanosensitive ion channel. | Adenylate cyclase, class 3. | 0.957 |
SDG33612.1 | gcvP | SAMN04489810_0024 | SAMN04489810_2013 | Mechanosensitive ion channel. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.792 |
SDG33612.1 | rpoA | SAMN04489810_0024 | SAMN04489810_0029 | Mechanosensitive ion channel. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.812 |
SDG33612.1 | rpoB | SAMN04489810_0024 | SAMN04489810_0077 | Mechanosensitive ion channel. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.851 |
SDG33612.1 | rpoC | SAMN04489810_0024 | SAMN04489810_0076 | Mechanosensitive ion channel. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.823 |
SDG33612.1 | rpoZ | SAMN04489810_0024 | SAMN04489810_2602 | Mechanosensitive ion channel. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.820 |
SDG33643.1 | SDG33612.1 | SAMN04489810_0025 | SAMN04489810_0024 | Adenylate cyclase, class 3. | Mechanosensitive ion channel. | 0.990 |
SDG33643.1 | SDG35843.1 | SAMN04489810_0025 | SAMN04489810_0084 | Adenylate cyclase, class 3. | Hypothetical protein. | 0.643 |
SDG33643.1 | SDH34776.1 | SAMN04489810_0025 | SAMN04489810_2859 | Adenylate cyclase, class 3. | Hypothetical protein. | 0.654 |
SDG33643.1 | SDH55976.1 | SAMN04489810_0025 | SAMN04489810_3324 | Adenylate cyclase, class 3. | Adenylate cyclase, class 3. | 0.686 |
SDG35843.1 | SDG33612.1 | SAMN04489810_0084 | SAMN04489810_0024 | Hypothetical protein. | Mechanosensitive ion channel. | 0.837 |
SDG35843.1 | SDG33643.1 | SAMN04489810_0084 | SAMN04489810_0025 | Hypothetical protein. | Adenylate cyclase, class 3. | 0.643 |
SDG35843.1 | SDH55976.1 | SAMN04489810_0084 | SAMN04489810_3324 | Hypothetical protein. | Adenylate cyclase, class 3. | 0.643 |
SDG35843.1 | rpoA | SAMN04489810_0084 | SAMN04489810_0029 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.916 |
SDG35843.1 | rpoB | SAMN04489810_0084 | SAMN04489810_0077 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
SDG35843.1 | rpoZ | SAMN04489810_0084 | SAMN04489810_2602 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.900 |
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