STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG45356.1Cellobiose ABC transporter membrane protein. (305 aa)    
Predicted Functional Partners:
SDG45404.1
Cellobiose ABC transporter membrane protein.
  0.996
SDG45436.1
Cellobiose-binding protein.
 
  0.989
SDG93267.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.974
SDG75203.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.914
SDG80877.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.904
SDG58952.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.894
SDG37886.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.889
SDG64619.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.889
SDG98023.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.876
SDH53465.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.872
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.