STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG46080.1ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein. (360 aa)    
Predicted Functional Partners:
SDG45964.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.980
SDG46001.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.980
SDG46044.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.971
SDG36243.1
NitT/TauT family transport system permease protein.
 
 
 0.905
SDG36319.1
NitT/TauT family transport system permease protein.
 
 
 0.897
SDG36281.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.794
SDG45928.1
Cupin domain-containing protein.
 
     0.755
SDG46196.1
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family.
 
   
 0.637
SDG46117.1
Allantoate deiminase.
 
     0.591
SDG46163.1
(S)-ureidoglycine-glyoxylate aminotransferase.
 
    0.580
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.