Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG35736.1 | SDG46196.1 | SAMN04489810_0081 | SAMN04489810_0368 | Sensor histidine kinase inhibitor, KipI family. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.770 |
SDG35736.1 | SDG51708.1 | SAMN04489810_0081 | SAMN04489810_0511 | Sensor histidine kinase inhibitor, KipI family. | Amidase. | 0.770 |
SDG46117.1 | SDG46163.1 | SAMN04489810_0366 | SAMN04489810_0367 | Allantoate deiminase. | (S)-ureidoglycine-glyoxylate aminotransferase. | 0.991 |
SDG46117.1 | SDG46196.1 | SAMN04489810_0366 | SAMN04489810_0368 | Allantoate deiminase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.854 |
SDG46117.1 | SDG46249.1 | SAMN04489810_0366 | SAMN04489810_0369 | Allantoate deiminase. | Acetamidase/formamidase. | 0.760 |
SDG46163.1 | SDG46117.1 | SAMN04489810_0367 | SAMN04489810_0366 | (S)-ureidoglycine-glyoxylate aminotransferase. | Allantoate deiminase. | 0.991 |
SDG46163.1 | SDG46196.1 | SAMN04489810_0367 | SAMN04489810_0368 | (S)-ureidoglycine-glyoxylate aminotransferase. | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | 0.843 |
SDG46163.1 | SDG46249.1 | SAMN04489810_0367 | SAMN04489810_0369 | (S)-ureidoglycine-glyoxylate aminotransferase. | Acetamidase/formamidase. | 0.742 |
SDG46163.1 | SDG51708.1 | SAMN04489810_0367 | SAMN04489810_0511 | (S)-ureidoglycine-glyoxylate aminotransferase. | Amidase. | 0.419 |
SDG46196.1 | SDG35736.1 | SAMN04489810_0368 | SAMN04489810_0081 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | Sensor histidine kinase inhibitor, KipI family. | 0.770 |
SDG46196.1 | SDG46117.1 | SAMN04489810_0368 | SAMN04489810_0366 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | Allantoate deiminase. | 0.854 |
SDG46196.1 | SDG46163.1 | SAMN04489810_0368 | SAMN04489810_0367 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | (S)-ureidoglycine-glyoxylate aminotransferase. | 0.843 |
SDG46196.1 | SDG46249.1 | SAMN04489810_0368 | SAMN04489810_0369 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | Acetamidase/formamidase. | 0.976 |
SDG46196.1 | SDG51708.1 | SAMN04489810_0368 | SAMN04489810_0511 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | Amidase. | 0.878 |
SDG46196.1 | SDG86871.1 | SAMN04489810_0368 | SAMN04489810_1514 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | Acylphosphatase. | 0.867 |
SDG46196.1 | aspS | SAMN04489810_0368 | SAMN04489810_1230 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily. | 0.931 |
SDG46196.1 | gatB | SAMN04489810_0368 | SAMN04489810_2318 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.993 |
SDG46196.1 | gatC | SAMN04489810_0368 | SAMN04489810_2316 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.979 |
SDG46196.1 | gltX | SAMN04489810_0368 | SAMN04489810_2197 | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; Belongs to the amidase family. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.876 |
SDG46249.1 | SDG46117.1 | SAMN04489810_0369 | SAMN04489810_0366 | Acetamidase/formamidase. | Allantoate deiminase. | 0.760 |
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