STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG60072.13alpha(or 20beta)-hydroxysteroid dehydrogenase. (262 aa)    
Predicted Functional Partners:
SDH24721.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.841
SDH24853.1
[acyl-carrier-protein] S-malonyltransferase.
 
  0.830
SDG71847.1
Short-chain dehydrogenase.
  
 
  0.784
SDH64159.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.765
SDH24803.1
3-oxoacyl-[acyl-carrier-protein] synthase-3; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.707
SDH54981.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
  
 
0.702
SDH28790.1
Glutamate synthase (NADH) large subunit.
     
 0.696
SDH29974.1
3-oxoacyl-[acyl-carrier-protein] reductase.
  
  
 
0.692
SDG84277.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.686
SDG60116.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.666
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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