STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG77679.1ferredoxin--NADP+ reductase. (457 aa)    
Predicted Functional Partners:
SDH28790.1
Glutamate synthase (NADH) large subunit.
  
 0.999
SDH58855.1
IMP dehydrogenase.
  
 0.956
SDG41234.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
 0.941
SDH30168.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
     
 0.862
SDH06793.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
 0.822
SDG77646.1
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
   
 0.815
menG
Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
 
 0.761
SDG45841.1
CO or xanthine dehydrogenase, Mo-binding subunit.
    
 0.726
SDG64004.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.725
SDG38669.1
O-acetylhomoserine sulfhydrylase.
   
    0.707
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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