STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG87899.1Protein of unknown function. (246 aa)    
Predicted Functional Partners:
SDG87859.1
Uncharacterized conserved protein, DUF305 family.
 
     0.957
SDG87830.1
Hypothetical protein.
       0.773
SDG62096.1
Hypothetical protein.
  
     0.663
SDH44435.1
Hypothetical protein.
  
     0.657
SDH12821.1
Hypothetical protein.
  
     0.539
SDG75375.1
Uncharacterized membrane protein.
  
     0.439
SDG87930.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
       0.430
SDG53252.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.