STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG88603.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
SDG88674.1
N-acylneuraminate cytidylyltransferase.
 
   
 0.960
SDG88717.1
Hypothetical protein.
 
   
 0.955
SDG88640.1
N-acetylneuraminate synthase.
 
   
 0.936
SDH09163.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.577
SDH09130.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
 
     0.518
SDH09098.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
 
     0.466
SDG88750.1
Hypothetical protein.
       0.441
SDG88790.1
Metallo-beta-lactamase superfamily protein.
       0.426
SDH43259.1
Lysophospholipase L1.
  
     0.404
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.