Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG39106.1 | SDH16109.1 | SAMN04489810_0166 | SAMN04489810_2271 | Broad specificity phosphatase PhoE; Belongs to the phosphoglycerate mutase family. | Hypothetical protein. | 0.413 |
SDG70659.1 | SDH16109.1 | SAMN04489810_1055 | SAMN04489810_2271 | Hypothetical protein. | Hypothetical protein. | 0.495 |
SDG75819.1 | SDH16109.1 | SAMN04489810_1206 | SAMN04489810_2271 | Uncharacterized protein. | Hypothetical protein. | 0.749 |
SDG96962.1 | SDH16109.1 | SAMN04489810_1786 | SAMN04489810_2271 | Hypothetical protein. | Hypothetical protein. | 0.749 |
SDH11398.1 | SDH13796.1 | SAMN04489810_2146 | SAMN04489810_2213 | Hypothetical protein. | Protein of unknown function. | 0.437 |
SDH11398.1 | SDH16109.1 | SAMN04489810_2146 | SAMN04489810_2271 | Hypothetical protein. | Hypothetical protein. | 0.570 |
SDH13796.1 | SDH11398.1 | SAMN04489810_2213 | SAMN04489810_2146 | Protein of unknown function. | Hypothetical protein. | 0.437 |
SDH13796.1 | SDH16109.1 | SAMN04489810_2213 | SAMN04489810_2271 | Protein of unknown function. | Hypothetical protein. | 0.541 |
SDH16064.1 | SDH16109.1 | SAMN04489810_2270 | SAMN04489810_2271 | Protein of unknown function. | Hypothetical protein. | 0.693 |
SDH16064.1 | ftsY | SAMN04489810_2270 | SAMN04489810_2269 | Protein of unknown function. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.616 |
SDH16064.1 | smc | SAMN04489810_2270 | SAMN04489810_2268 | Protein of unknown function. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.557 |
SDH16109.1 | SDG39106.1 | SAMN04489810_2271 | SAMN04489810_0166 | Hypothetical protein. | Broad specificity phosphatase PhoE; Belongs to the phosphoglycerate mutase family. | 0.413 |
SDH16109.1 | SDG70659.1 | SAMN04489810_2271 | SAMN04489810_1055 | Hypothetical protein. | Hypothetical protein. | 0.495 |
SDH16109.1 | SDG75819.1 | SAMN04489810_2271 | SAMN04489810_1206 | Hypothetical protein. | Uncharacterized protein. | 0.749 |
SDH16109.1 | SDG96962.1 | SAMN04489810_2271 | SAMN04489810_1786 | Hypothetical protein. | Hypothetical protein. | 0.749 |
SDH16109.1 | SDH11398.1 | SAMN04489810_2271 | SAMN04489810_2146 | Hypothetical protein. | Hypothetical protein. | 0.570 |
SDH16109.1 | SDH13796.1 | SAMN04489810_2271 | SAMN04489810_2213 | Hypothetical protein. | Protein of unknown function. | 0.541 |
SDH16109.1 | SDH16064.1 | SAMN04489810_2271 | SAMN04489810_2270 | Hypothetical protein. | Protein of unknown function. | 0.693 |
SDH16109.1 | ftsY | SAMN04489810_2271 | SAMN04489810_2269 | Hypothetical protein. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.517 |
SDH16109.1 | smc | SAMN04489810_2271 | SAMN04489810_2268 | Hypothetical protein. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.464 |
page 1 of 2