Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG86026.1 | SDH29525.1 | SAMN04489810_1491 | SAMN04489810_2657 | Acyl dehydratase; Belongs to the UPF0336 family. | PAC2 family protein. | 0.508 |
SDG86026.1 | rpoZ | SAMN04489810_1491 | SAMN04489810_2602 | Acyl dehydratase; Belongs to the UPF0336 family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.437 |
SDH08208.1 | SDH29525.1 | SAMN04489810_2057 | SAMN04489810_2657 | Putative hydrolase. | PAC2 family protein. | 0.540 |
SDH08208.1 | nucS | SAMN04489810_2057 | SAMN04489810_0442 | Putative hydrolase. | Hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.658 |
SDH08208.1 | rpoZ | SAMN04489810_2057 | SAMN04489810_2602 | Putative hydrolase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.625 |
SDH29441.1 | SDH29456.1 | SAMN04489810_2652 | SAMN04489810_2653 | Proteasome accessory factor C. | Proteasome accessory factor B. | 0.953 |
SDH29441.1 | SDH29471.1 | SAMN04489810_2652 | SAMN04489810_2654 | Proteasome accessory factor C. | Peptidylprolyl isomerase. | 0.627 |
SDH29441.1 | SDH29490.1 | SAMN04489810_2652 | SAMN04489810_2655 | Proteasome accessory factor C. | tRNA (adenine57-N1/adenine58-N1)-methyltransferase. | 0.641 |
SDH29441.1 | SDH29507.1 | SAMN04489810_2652 | SAMN04489810_2656 | Proteasome accessory factor C. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | 0.624 |
SDH29441.1 | SDH29525.1 | SAMN04489810_2652 | SAMN04489810_2657 | Proteasome accessory factor C. | PAC2 family protein. | 0.538 |
SDH29441.1 | rpoZ | SAMN04489810_2652 | SAMN04489810_2602 | Proteasome accessory factor C. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.843 |
SDH29456.1 | SDH29441.1 | SAMN04489810_2653 | SAMN04489810_2652 | Proteasome accessory factor B. | Proteasome accessory factor C. | 0.953 |
SDH29456.1 | SDH29471.1 | SAMN04489810_2653 | SAMN04489810_2654 | Proteasome accessory factor B. | Peptidylprolyl isomerase. | 0.627 |
SDH29456.1 | SDH29490.1 | SAMN04489810_2653 | SAMN04489810_2655 | Proteasome accessory factor B. | tRNA (adenine57-N1/adenine58-N1)-methyltransferase. | 0.682 |
SDH29456.1 | SDH29507.1 | SAMN04489810_2653 | SAMN04489810_2656 | Proteasome accessory factor B. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. | 0.624 |
SDH29456.1 | SDH29525.1 | SAMN04489810_2653 | SAMN04489810_2657 | Proteasome accessory factor B. | PAC2 family protein. | 0.620 |
SDH29456.1 | rpoZ | SAMN04489810_2653 | SAMN04489810_2602 | Proteasome accessory factor B. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.846 |
SDH29471.1 | SDH29441.1 | SAMN04489810_2654 | SAMN04489810_2652 | Peptidylprolyl isomerase. | Proteasome accessory factor C. | 0.627 |
SDH29471.1 | SDH29456.1 | SAMN04489810_2654 | SAMN04489810_2653 | Peptidylprolyl isomerase. | Proteasome accessory factor B. | 0.627 |
SDH29471.1 | SDH29490.1 | SAMN04489810_2654 | SAMN04489810_2655 | Peptidylprolyl isomerase. | tRNA (adenine57-N1/adenine58-N1)-methyltransferase. | 0.813 |
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