STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH31706.1Protein of unknown function. (122 aa)    
Predicted Functional Partners:
SDH26483.1
Protein of unknown function.
  
     0.684
SDH30688.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
     0.675
SDH30772.1
Protein of unknown function.
  
     0.673
SDH31762.1
Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family.
 
     0.660
SDH24688.1
Protein of unknown function.
  
     0.643
SDH26069.1
Protein of unknown function.
  
     0.615
SDH30696.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
  
     0.607
SDH30730.1
Cytochrome c oxidase subunit IV.
  
     0.597
mraZ
MraZ protein; Belongs to the MraZ family.
       0.576
SDH31562.1
Hypothetical protein.
 
     0.562
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.