Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG40926.1 | SDH41353.1 | SAMN04489810_0217 | SAMN04489810_3000 | Hypothetical protein. | Hypothetical protein. | 0.462 |
SDG53208.1 | SDH41353.1 | SAMN04489810_0554 | SAMN04489810_3000 | Putative copper resistance protein D. | Hypothetical protein. | 0.437 |
SDG53208.1 | SDH41416.1 | SAMN04489810_0554 | SAMN04489810_3001 | Putative copper resistance protein D. | Uncharacterized protein YcnI. | 0.855 |
SDH20253.1 | SDH41353.1 | SAMN04489810_2371 | SAMN04489810_3000 | Protein of unknown function. | Hypothetical protein. | 0.487 |
SDH38838.1 | SDH41353.1 | SAMN04489810_2946 | SAMN04489810_3000 | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Hypothetical protein. | 0.466 |
SDH41306.1 | SDH41353.1 | SAMN04489810_2999 | SAMN04489810_3000 | Hypothetical protein. | Hypothetical protein. | 0.605 |
SDH41353.1 | SDG40926.1 | SAMN04489810_3000 | SAMN04489810_0217 | Hypothetical protein. | Hypothetical protein. | 0.462 |
SDH41353.1 | SDG53208.1 | SAMN04489810_3000 | SAMN04489810_0554 | Hypothetical protein. | Putative copper resistance protein D. | 0.437 |
SDH41353.1 | SDH20253.1 | SAMN04489810_3000 | SAMN04489810_2371 | Hypothetical protein. | Protein of unknown function. | 0.487 |
SDH41353.1 | SDH38838.1 | SAMN04489810_3000 | SAMN04489810_2946 | Hypothetical protein. | Deferrochelatase/peroxidase EfeB; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.466 |
SDH41353.1 | SDH41306.1 | SAMN04489810_3000 | SAMN04489810_2999 | Hypothetical protein. | Hypothetical protein. | 0.605 |
SDH41353.1 | SDH41416.1 | SAMN04489810_3000 | SAMN04489810_3001 | Hypothetical protein. | Uncharacterized protein YcnI. | 0.570 |
SDH41416.1 | SDG53208.1 | SAMN04489810_3001 | SAMN04489810_0554 | Uncharacterized protein YcnI. | Putative copper resistance protein D. | 0.855 |
SDH41416.1 | SDH41353.1 | SAMN04489810_3001 | SAMN04489810_3000 | Uncharacterized protein YcnI. | Hypothetical protein. | 0.570 |