Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG54488.1 | SDH48911.1 | SAMN04489810_0588 | SAMN04489810_3166 | Glycosyltransferase involved in cell wall bisynthesis. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.506 |
SDG54488.1 | SDH49113.1 | SAMN04489810_0588 | SAMN04489810_3170 | Glycosyltransferase involved in cell wall bisynthesis. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.492 |
SDG67861.1 | SDH49113.1 | SAMN04489810_0976 | SAMN04489810_3170 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.515 |
SDH31562.1 | SDH49113.1 | SAMN04489810_2792 | SAMN04489810_3170 | Hypothetical protein. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.478 |
SDH48911.1 | SDG54488.1 | SAMN04489810_3166 | SAMN04489810_0588 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Glycosyltransferase involved in cell wall bisynthesis. | 0.506 |
SDH48911.1 | SDH49052.1 | SAMN04489810_3166 | SAMN04489810_3169 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Glycosyl transferases group 1. | 0.506 |
SDH48911.1 | SDH49113.1 | SAMN04489810_3166 | SAMN04489810_3170 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.471 |
SDH49004.1 | SDH49052.1 | SAMN04489810_3168 | SAMN04489810_3169 | Hypothetical protein. | Glycosyl transferases group 1. | 0.753 |
SDH49004.1 | SDH49113.1 | SAMN04489810_3168 | SAMN04489810_3170 | Hypothetical protein. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.709 |
SDH49004.1 | SDH49256.1 | SAMN04489810_3168 | SAMN04489810_3173 | Hypothetical protein. | PH domain-containing protein. | 0.419 |
SDH49004.1 | purE | SAMN04489810_3168 | SAMN04489810_3171 | Hypothetical protein. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.709 |
SDH49004.1 | purK | SAMN04489810_3168 | SAMN04489810_3172 | Hypothetical protein. | 5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.552 |
SDH49052.1 | SDH48911.1 | SAMN04489810_3169 | SAMN04489810_3166 | Glycosyl transferases group 1. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.506 |
SDH49052.1 | SDH49004.1 | SAMN04489810_3169 | SAMN04489810_3168 | Glycosyl transferases group 1. | Hypothetical protein. | 0.753 |
SDH49052.1 | SDH49113.1 | SAMN04489810_3169 | SAMN04489810_3170 | Glycosyl transferases group 1. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.782 |
SDH49052.1 | SDH49256.1 | SAMN04489810_3169 | SAMN04489810_3173 | Glycosyl transferases group 1. | PH domain-containing protein. | 0.667 |
SDH49052.1 | purE | SAMN04489810_3169 | SAMN04489810_3171 | Glycosyl transferases group 1. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.782 |
SDH49052.1 | purK | SAMN04489810_3169 | SAMN04489810_3172 | Glycosyl transferases group 1. | 5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.598 |
SDH49113.1 | SDG54488.1 | SAMN04489810_3170 | SAMN04489810_0588 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.492 |
SDH49113.1 | SDG67861.1 | SAMN04489810_3170 | SAMN04489810_0976 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.515 |
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