STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH55184.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (345 aa)    
Predicted Functional Partners:
SDH55222.1
acyl-CoA dehydrogenase.
  0.995
SDH55146.1
acyl-CoA thioester hydrolase.
 
     0.787
SDH55350.1
NADPH2:quinone reductase.
  
  0.697
SDH55020.1
Acyl dehydratase.
 
   0.684
SDH55099.1
Hypothetical protein.
 
     0.668
SDG63582.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.607
SDH55435.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
   0.558
SDG38801.1
Long-chain acyl-CoA synthetase.
   
  0.547
SDG77154.1
O-succinylbenzoic acid--CoA ligase.
   
  0.547
SDH17986.1
Long-chain acyl-CoA synthetase.
   
  0.547
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
Server load: low (14%) [HD]