STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH61258.1acyl-CoA ligase (AMP-forming), exosortase A-associated. (524 aa)    
Predicted Functional Partners:
SDH64159.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 0.995
SDH61169.1
Acyl carrier protein.
 
  0.970
SDH61213.1
Diaminopimelate decarboxylase.
 
    0.945
SDH64251.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
    
0.903
SDH64200.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
     0.884
SDH61362.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.804
SDH61295.1
Hypothetical protein.
 
     0.801
SDH61127.1
Asparagine synthase (glutamine-hydrolysing).
 
    0.796
SDH61330.1
Glycosyl transferase family 2.
  
   0.793
SDH61407.1
Glycosyl transferase family 2.
   
   0.783
Your Current Organism:
Microbacterium pygmaeum
NCBI taxonomy Id: 370764
Other names: DSM 23142, JCM 15925, M. pygmaeum, Microbacterium pygmaeum Kageyama et al. 2008, Microbacterium sp. KV-490, NBRC 101800, NRRL B-24469, strain KV-490
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.