STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng30370DBnaAnng30370D protein. (252 aa)    
Predicted Functional Partners:
BnaA09g44610D
BnaA09g44610D protein.
     
 0.647
BnaAnng39810D
BnaAnng39810D protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.619
BnaA06g38790D
BnaA06g38790D protein.
 
 
 0.605
BnaC05g14020D
BnaC05g14020D protein.
  
  
 0.569
BnaA06g12420D
BnaA06g12420D protein.
  
  
 0.569
BnaC04g56430D
BnaC04g56430D protein.
 
  
 0.557
BnaC03g14040D
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.548
BnaA10g09920D
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.548
BnaC09g32370D
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.548
BnaA03g11210D
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.548
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.