STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g17510DBnaA03g17510D protein. (207 aa)    
Predicted Functional Partners:
BnaA01g12860D
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments. Belongs to the PRA1 family.
  
     0.485
BnaC06g04110D
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments. Belongs to the PRA1 family.
  
     0.478
BnaC03g27900D
BnaC03g27900D protein.
  
     0.462
BnaC05g48410D
BnaC05g48410D protein.
  
     0.461
BnaAnng16810D
BnaAnng16810D protein.
  
     0.461
BnaC09g42220D
BnaC09g42220D protein.
  
     0.460
BnaA01g33130D
BnaA01g33130D protein.
  
     0.460
BnaA04g29070D
BnaA04g29070D protein.
  
     0.457
BnaA05g37110D
BnaA05g37110D protein.
  
     0.454
BnaC09g41420D
BnaC09g41420D protein.
  
    0.448
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.