STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g47620DBnaA07g36250D protein. (117 aa)    
Predicted Functional Partners:
BnaC03g59080D
Methyltransferase.
  
 
  0.540
BnaC03g76010D
Methyltransferase.
  
 
  0.531
BnaC03g77770D
BnaC03g77770D protein.
  
     0.530
BnaCnng13860D
BnaCnng13860D protein.
  
     0.527
BnaA03g48710D
BnaA03g48710D protein.
  
     0.526
BnaUnng00150D
BnaUnng00150D protein.
  
     0.525
BnaCnng64200D
BnaCnng64200D protein.
  
     0.524
BnaAnng35600D
Methyltransferase.
  
     0.524
BnaA09g00920D
BnaA09g00920D protein.
  
     0.523
BnaC05g46640D
BnaC05g46640D protein.
  
     0.523
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.