Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA02g04740D | BnaA06g16180D | A0A078I502 | A0A078F8N3 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | 0.984 |
BnaA02g04740D | BnaA09g55740D | A0A078I502 | A0A078J2L7 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | BnaA09g55740D protein. | 0.928 |
BnaA02g04740D | BnaAnng19390D | A0A078I502 | A0A078JCZ3 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | BnaAnng19390D protein; Belongs to the universal ribosomal protein uS9 family. | 0.984 |
BnaA02g04740D | BnaC03g36030D | A0A078I502 | A0A078F0F8 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | BnaC03g36030D protein. | 0.990 |
BnaA02g04740D | BnaC05g12790D | A0A078I502 | A0A078HQX7 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
BnaA02g04740D | BnaC09g39060D | A0A078I502 | A0A078DTJ9 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | BnaC09g39060D protein. | 0.999 |
BnaA02g04740D | rpl20 | A0A078I502 | D1L8R1 | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
BnaA04g05330D | BnaC03g36030D | A0A078GCW5 | A0A078F0F8 | BnaA04g05330D protein. | BnaC03g36030D protein. | 0.983 |
BnaA04g05330D | BnaC04g08700D | A0A078GCW5 | A0A078H6L6 | BnaA04g05330D protein. | BnaC04g08700D protein. | 0.999 |
BnaA04g05330D | BnaC05g12790D | A0A078GCW5 | A0A078HQX7 | BnaA04g05330D protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.459 |
BnaA04g05330D | BnaC06g14370D | A0A078GCW5 | A0A078CGB5 | BnaA04g05330D protein. | BnaC06g14370D protein. | 0.999 |
BnaA06g16180D | BnaA02g04740D | A0A078F8N3 | A0A078I502 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.984 |
BnaA06g16180D | BnaA09g55740D | A0A078F8N3 | A0A078J2L7 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | BnaA09g55740D protein. | 0.988 |
BnaA06g16180D | BnaAnng19390D | A0A078F8N3 | A0A078JCZ3 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | BnaAnng19390D protein; Belongs to the universal ribosomal protein uS9 family. | 0.587 |
BnaA06g16180D | BnaC03g36030D | A0A078F8N3 | A0A078F0F8 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | BnaC03g36030D protein. | 0.967 |
BnaA06g16180D | BnaC05g12790D | A0A078F8N3 | A0A078HQX7 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
BnaA06g16180D | BnaC09g39060D | A0A078F8N3 | A0A078DTJ9 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | BnaC09g39060D protein. | 0.999 |
BnaA06g16180D | rpl20 | A0A078F8N3 | D1L8R1 | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
BnaA09g55740D | BnaA02g04740D | A0A078J2L7 | A0A078I502 | BnaA09g55740D protein. | Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. | 0.928 |
BnaA09g55740D | BnaA06g16180D | A0A078J2L7 | A0A078F8N3 | BnaA09g55740D protein. | BnaA06g16180D protein; Belongs to the universal ribosomal protein uS9 family. | 0.988 |
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