STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC05g26880DATP-dependent DNA helicase; Belongs to the helicase family. (371 aa)    
Predicted Functional Partners:
BnaC06g03150D
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.505
BnaC09g15140D
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.500
BnaC06g04840D
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.498
BnaCnng77850D
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.498
BnaC01g23600D
BnaC01g23600D protein.
  
     0.496
BnaCnng64500D
BnaCnng64500D protein.
  
     0.495
BnaC06g05750D
BnaC06g05750D protein.
  
     0.493
BnaC04g06370D
BnaC04g06370D protein.
  
     0.491
BnaC02g24590D
BnaC02g24590D protein.
  
     0.489
BnaAnng28910D
BnaAnng28910D protein.
  
     0.488
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.