Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g47910DBnaC03g47910D protein. (565 aa)    
Predicted Functional Partners:
BnaA08g13250D
BnaA08g13250D protein.
      
 0.441
BnaA03g49900D
BnaA03g49900D protein.
      
 0.441
BnaA07g00650D
BnaA07g00650D protein.
    
 0.440
BnaC09g26100D
BnaC09g26100D protein.
    
 0.439
BnaC02g40280D
BnaC02g40280D protein.
      
 0.435
BnaC07g49590D
Chloride channel protein.
      
 0.435
BnaA09g04610D
BnaA09g04610D protein.
      
 0.434
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.