STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g25030DBnaA07g25030D protein; Belongs to the glycosyltransferase 47 family. (433 aa)    
Predicted Functional Partners:
BnaC02g02680D
BnaC02g02680D protein.
    
 0.526
BnaC02g02690D
BnaC02g02690D protein.
    
 0.526
BnaA09g35400D
BnaA09g35400D protein.
    
 0.526
BnaC09g50610D
BnaC09g50610D protein.
    
 0.526
BnaA01g07940D
BnaA01g07940D protein; Belongs to the protein kinase superfamily.
      
 0.470
BnaAnng11590D
BnaAnng11590D protein.
      
 0.467
BnaA04g21380D
BnaA04g21380D protein.
      
 0.465
BnaA04g16720D
RING-type E3 ubiquitin transferase.
      
 0.435
BnaC09g43210D
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
      
 0.405
BnaC03g71400D
Exocyst subunit Exo70 family protein; Component of the exocyst complex.
      
 0.405
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.