STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g05360DBnaA02g05360D protein. (249 aa)    
Predicted Functional Partners:
BnaC05g00520D
BnaC05g00520D protein.
      
 0.805
BnaA06g01090D
BnaA06g01090D protein.
      
 0.690
BnaA02g07110D
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
      
 0.648
BnaA02g07120D
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
      
 0.648
BnaA01g12890D
BnaA01g12890D protein.
      
 0.648
BnaA10g29660D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.648
BnaA06g02670D
BnaA06g02670D protein.
      
 0.580
BnaA02g05340D
BnaA02g05340D protein.
      
 0.506
BnaC01g09830D
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.496
BnaA06g36270D
BnaA06g36270D protein.
      
 0.493
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.