Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g24140D | BnaA06g11440D | A0A078HFA5 | A0A078HCD4 | BnaA01g24140D protein. | BnaA06g11440D protein. | 0.939 |
BnaA01g24140D | BnaA06g23620D | A0A078HFA5 | A0A078F709 | BnaA01g24140D protein. | Cyclin; Belongs to the cyclin family. | 0.588 |
BnaA01g24140D | BnaA08g29690D | A0A078HFA5 | A0A078JKE9 | BnaA01g24140D protein. | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | 0.949 |
BnaA01g24140D | BnaA10g11190D | A0A078HFA5 | A0A078HKT6 | BnaA01g24140D protein. | DNA ligase. | 0.981 |
BnaA01g24140D | BnaC05g13070D | A0A078HFA5 | A0A078HTD5 | BnaA01g24140D protein. | BnaC05g13070D protein. | 0.939 |
BnaA01g24140D | BnaC06g27700D | A0A078HFA5 | A0A078HEM6 | BnaA01g24140D protein. | DNA ligase. | 0.955 |
BnaA01g24140D | BnaC09g40580D | A0A078HFA5 | A0A078FVD4 | BnaA01g24140D protein. | BnaC09g40580D protein. | 0.865 |
BnaA01g24140D | BnaC09g53370D | A0A078HFA5 | A0A078IRX8 | BnaA01g24140D protein. | DNA ligase. | 0.981 |
BnaA01g24140D | BnaCnng41270D | A0A078HFA5 | A0A078JBE4 | BnaA01g24140D protein. | BnaCnng41270D protein. | 0.543 |
BnaA01g24140D | BnaCnng53340D | A0A078HFA5 | A0A078JJV3 | BnaA01g24140D protein. | BnaCnng53340D protein. | 0.543 |
BnaA06g11440D | BnaA01g24140D | A0A078HCD4 | A0A078HFA5 | BnaA06g11440D protein. | BnaA01g24140D protein. | 0.939 |
BnaA06g11440D | BnaA06g23620D | A0A078HCD4 | A0A078F709 | BnaA06g11440D protein. | Cyclin; Belongs to the cyclin family. | 0.698 |
BnaA06g11440D | BnaA08g29690D | A0A078HCD4 | A0A078JKE9 | BnaA06g11440D protein. | ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. | 0.997 |
BnaA06g11440D | BnaA10g11190D | A0A078HCD4 | A0A078HKT6 | BnaA06g11440D protein. | DNA ligase. | 0.981 |
BnaA06g11440D | BnaC05g13070D | A0A078HCD4 | A0A078HTD5 | BnaA06g11440D protein. | BnaC05g13070D protein. | 0.900 |
BnaA06g11440D | BnaC06g27700D | A0A078HCD4 | A0A078HEM6 | BnaA06g11440D protein. | DNA ligase. | 0.991 |
BnaA06g11440D | BnaC09g40580D | A0A078HCD4 | A0A078FVD4 | BnaA06g11440D protein. | BnaC09g40580D protein. | 0.950 |
BnaA06g11440D | BnaC09g53370D | A0A078HCD4 | A0A078IRX8 | BnaA06g11440D protein. | DNA ligase. | 0.981 |
BnaA06g11440D | BnaCnng41270D | A0A078HCD4 | A0A078JBE4 | BnaA06g11440D protein. | BnaCnng41270D protein. | 0.939 |
BnaA06g11440D | BnaCnng53340D | A0A078HCD4 | A0A078JJV3 | BnaA06g11440D protein. | BnaCnng53340D protein. | 0.939 |
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