Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g33430D | BnaA03g18330D | A0A078G7W8 | A0A078F7L9 | BnaA01g33430D protein. | BnaA03g18330D protein. | 0.959 |
BnaA01g33430D | BnaC01g10540D | A0A078G7W8 | A0A078I0W6 | BnaA01g33430D protein. | BnaC01g10540D protein. | 0.533 |
BnaA01g33430D | BnaC01g39920D | A0A078G7W8 | A0A078GWZ4 | BnaA01g33430D protein. | BnaC01g39920D protein. | 0.536 |
BnaA01g33430D | BnaC03g33870D | A0A078G7W8 | A0A078HSH5 | BnaA01g33430D protein. | BnaC03g33870D protein. | 0.537 |
BnaA01g33430D | BnaC04g22480D | A0A078G7W8 | A0A078I0P8 | BnaA01g33430D protein. | BnaC04g22480D protein. | 0.542 |
BnaA01g33430D | BnaC04g22490D | A0A078G7W8 | A0A078HXR7 | BnaA01g33430D protein. | BnaC04g22490D protein. | 0.533 |
BnaA01g33430D | BnaC05g49500D | A0A078G7W8 | A0A078IPA4 | BnaA01g33430D protein. | BnaC05g49500D protein. | 0.543 |
BnaA01g33430D | BnaC05g49510D | A0A078G7W8 | A0A078IRP6 | BnaA01g33430D protein. | BnaC05g49510D protein. | 0.533 |
BnaA01g33430D | BnaC08g02310D | A0A078G7W8 | A0A078H5R4 | BnaA01g33430D protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.918 |
BnaA01g33430D | BnaCnng61820D | A0A078G7W8 | A0A078JRN1 | BnaA01g33430D protein. | BnaCnng61820D protein. | 0.533 |
BnaA03g18330D | BnaA01g33430D | A0A078F7L9 | A0A078G7W8 | BnaA03g18330D protein. | BnaA01g33430D protein. | 0.959 |
BnaA03g18330D | BnaC01g10540D | A0A078F7L9 | A0A078I0W6 | BnaA03g18330D protein. | BnaC01g10540D protein. | 0.959 |
BnaA03g18330D | BnaC01g39920D | A0A078F7L9 | A0A078GWZ4 | BnaA03g18330D protein. | BnaC01g39920D protein. | 0.959 |
BnaA03g18330D | BnaC03g33870D | A0A078F7L9 | A0A078HSH5 | BnaA03g18330D protein. | BnaC03g33870D protein. | 0.959 |
BnaA03g18330D | BnaC04g22480D | A0A078F7L9 | A0A078I0P8 | BnaA03g18330D protein. | BnaC04g22480D protein. | 0.959 |
BnaA03g18330D | BnaC04g22490D | A0A078F7L9 | A0A078HXR7 | BnaA03g18330D protein. | BnaC04g22490D protein. | 0.959 |
BnaA03g18330D | BnaC05g49500D | A0A078F7L9 | A0A078IPA4 | BnaA03g18330D protein. | BnaC05g49500D protein. | 0.959 |
BnaA03g18330D | BnaC05g49510D | A0A078F7L9 | A0A078IRP6 | BnaA03g18330D protein. | BnaC05g49510D protein. | 0.959 |
BnaA03g18330D | BnaC08g02310D | A0A078F7L9 | A0A078H5R4 | BnaA03g18330D protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.965 |
BnaA03g18330D | BnaCnng61820D | A0A078F7L9 | A0A078JRN1 | BnaA03g18330D protein. | BnaCnng61820D protein. | 0.959 |
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