STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g18080DAnnexin. (319 aa)    
Predicted Functional Partners:
BnaCnng46660D
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.685
BnaC07g32020D
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.680
BnaA08g04320D
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.680
BnaC04g18700D
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.644
BnaA09g03360D
BnaA09g03360D protein.
     
 0.626
BnaC08g43170D
Calreticulin.
      
 0.623
BnaA08g26940D
Calreticulin.
      
 0.623
BnaCnng25840D
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.620
BnaC04g08410D
BnaC04g08410D protein.
      
 0.619
BnaA06g32230D
Prohibitin.
    
 
 0.605
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.